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Species belonging to selected taxon:
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST005890
species:
Triticum aestivum
miRNA family:
MIRf129
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCGGAGGGATTCCCTCCTTG
miRNA*
AGGGTGGACTCCTTCTGAATG
mismatches:
5
bulges:
0
View larger
pre-miRNA
ACGAAGCCTGAGCACCAGGTGG
AGGGTGGACTCCTTCTGAATG
TTGTAGTCAGCCAGGGTGCGGNCATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGC
TGCTGG
TCCGGAGGGATTCCCTCCTTG
TCCTGGATCTTGGGCTTGA
dot-bracket secondary structure
...(((((((((..(((((..(
((((.(((.((((((((...(
(((....)))).((((((....))))))(((((.((..(((..((....)).)))))
.)))))
..)))))))).))).))))).
.)))))..)))))))))..
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10060-akr
:
3e-20
microPC
no hits
UniProt
sp|P0CH32|UBQ4_ARATH: 5e-19
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
degradome data
download this record